Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubqln1Q8R317 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Gm18733-201ENSMUST00000173950 856 ntBASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Gm15590-201ENSMUST00000078419 552 ntBASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubqln1Q8R317 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Gm12350-201ENSMUST00000121208 462 ntBASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Gm5867-201ENSMUST00000063197 592 ntBASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubqln1Q8R317 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubqln1Q8R317 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms