Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Gm4535-201ENSMUST00000182274 558 ntBASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Gm10355-201ENSMUST00000097146 517 ntBASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox30Q8CGW4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.43■□□□□ 0.22
Sox30Q8CGW4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox30Q8CGW4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gm7284-201ENSMUST00000131667 944 ntBASIC16.42■□□□□ 0.22
Sox30Q8CGW4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gm5682-201ENSMUST00000173402 505 ntBASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gm9682-201ENSMUST00000197505 556 ntBASIC16.42■□□□□ 0.22
Sox30Q8CGW4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox30Q8CGW4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Gm37153-201ENSMUST00000193637 231 ntBASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Gm33142-201ENSMUST00000193913 867 ntBASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox30Q8CGW4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms