Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc28bQ8CEG5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc28bQ8CEG5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc28bQ8CEG5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc28bQ8CEG5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc28bQ8CEG5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc28bQ8CEG5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc28bQ8CEG5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc28bQ8CEG5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Gm13312-201ENSMUST00000119631 718 ntBASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc28bQ8CEG5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc28bQ8CEG5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccdc28bQ8CEG5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc28bQ8CEG5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc28bQ8CEG5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc28bQ8CEG5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc28bQ8CEG5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms