Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp44Q8C2S0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Usp44Q8C2S0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Usp44Q8C2S0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Mir3113-201ENSMUST00000175478 76 ntBASIC17.58■□□□□ 0.4
Usp44Q8C2S0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp44Q8C2S0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Usp44Q8C2S0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Carlr-201ENSMUST00000181515 2574 ntBASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Gm20553-201ENSMUST00000204205 844 ntBASIC17.56■□□□□ 0.4
Usp44Q8C2S0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp44Q8C2S0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Rpph1-201ENSMUST00000175096 319 ntBASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp44Q8C2S0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms