Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim4Q8C1Q6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Gm17807-201ENSMUST00000186869 298 ntBASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Smim4Q8C1Q6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim4Q8C1Q6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms