Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Gm8655-201ENSMUST00000221159 852 ntBASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp2bQ8BJF9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm8097-201ENSMUST00000117903 829 ntBASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms