Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Gm1401-201ENSMUST00000122048 772 ntBASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Psmb5-202ENSMUST00000227257 622 ntBASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4bQ8BGE6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Gm14140-201ENSMUST00000119999 995 ntBASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.17□□□□□ -0.14
Atg4bQ8BGE6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Gm13597-201ENSMUST00000121239 375 ntBASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.16□□□□□ -0.14
Atg4bQ8BGE6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms