Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nucks1Q80XU3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Gm21362-201ENSMUST00000194272 928 ntBASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.1■□□□□ 0.17
Nucks1Q80XU3 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.1■□□□□ 0.17
Nucks1Q80XU3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nucks1Q80XU3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Gm18489-201ENSMUST00000172565 551 ntBASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nucks1Q80XU3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Nucks1Q80XU3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nucks1Q80XU3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nucks1Q80XU3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.08■□□□□ 0.17
Nucks1Q80XU3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nucks1Q80XU3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nucks1Q80XU3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Nucks1Q80XU3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Gm6089-201ENSMUST00000197666 938 ntBASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nucks1Q80XU3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Gm25990-201ENSMUST00000102440 86 ntBASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Gm37153-201ENSMUST00000193637 231 ntBASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nucks1Q80XU3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nucks1Q80XU3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms