Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nrde2Q80XC6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nrde2Q80XC6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nrde2Q80XC6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nrde2Q80XC6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Gm7774-201ENSMUST00000200064 533 ntBASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nrde2Q80XC6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Mir449b-201ENSMUST00000104833 80 ntBASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Gm12008-201ENSMUST00000117791 755 ntBASIC15.29■□□□□ 0.04
Nrde2Q80XC6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nrde2Q80XC6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nrde2Q80XC6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Gm24158-201ENSMUST00000175263 71 ntBASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nrde2Q80XC6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms