Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Gm24158-201ENSMUST00000175263 71 ntBASIC13.89□□□□□ -0.19
Pif1Q80SX8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.88□□□□□ -0.19
Pif1Q80SX8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.88□□□□□ -0.19
Pif1Q80SX8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm10253-201ENSMUST00000194270 940 ntBASIC13.88□□□□□ -0.19
Pif1Q80SX8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pif1Q80SX8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.87□□□□□ -0.19
Pif1Q80SX8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.87□□□□□ -0.19
Pif1Q80SX8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pif1Q80SX8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms