Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.42■□□□□ 0.22
Snd1Q78PY7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Snd1Q78PY7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snd1Q78PY7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.41■□□□□ 0.22
Snd1Q78PY7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snd1Q78PY7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Gm6443-201ENSMUST00000203599 874 ntBASIC16.4■□□□□ 0.22
Snd1Q78PY7 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.4■□□□□ 0.22
Snd1Q78PY7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.4■□□□□ 0.22
Snd1Q78PY7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snd1Q78PY7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Snd1Q78PY7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Snd1Q78PY7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Snd1Q78PY7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Snd1Q78PY7 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.39■□□□□ 0.21
Snd1Q78PY7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.39■□□□□ 0.21
Snd1Q78PY7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Gm43514-201ENSMUST00000198852 424 ntBASIC16.39■□□□□ 0.21
Snd1Q78PY7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.39■□□□□ 0.21
Snd1Q78PY7 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.39■□□□□ 0.21
Snd1Q78PY7 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.39■□□□□ 0.21
Snd1Q78PY7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snd1Q78PY7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms