Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Gm27920-201ENSMUST00000183953 96 ntBASIC12.64□□□□□ -0.39
Rif1Q6PR54 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.64□□□□□ -0.39
Rif1Q6PR54 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.63□□□□□ -0.39
Rif1Q6PR54 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Gm9522-201ENSMUST00000182394 926 ntBASIC12.63□□□□□ -0.39
Rif1Q6PR54 Gm7783-201ENSMUST00000204795 781 ntBASIC12.63□□□□□ -0.39
Rif1Q6PR54 Gm45930-201ENSMUST00000221330 292 ntBASIC12.63□□□□□ -0.39
Rif1Q6PR54 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.63□□□□□ -0.39
Rif1Q6PR54 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rif1Q6PR54 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Gm27847-201ENSMUST00000183711 107 ntBASIC12.62□□□□□ -0.39
Rif1Q6PR54 Gm27375-201ENSMUST00000183799 107 ntBASIC12.62□□□□□ -0.39
Rif1Q6PR54 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.62□□□□□ -0.39
Rif1Q6PR54 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.62□□□□□ -0.39
Rif1Q6PR54 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.62□□□□□ -0.39
Rif1Q6PR54 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.62□□□□□ -0.39
Rif1Q6PR54 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rif1Q6PR54 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms