Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd4Q6PDQ2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chd4Q6PDQ2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.39■□□□□ 0.7
Chd4Q6PDQ2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Chd4Q6PDQ2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chd4Q6PDQ2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.39■□□□□ 0.7
Chd4Q6PDQ2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd4Q6PDQ2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chd4Q6PDQ2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd4Q6PDQ2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd4Q6PDQ2 BC037039-201ENSMUST00000192003 2205 ntBASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd4Q6PDQ2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd4Q6PDQ2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd4Q6PDQ2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd4Q6PDQ2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd4Q6PDQ2 Gm33320-201ENSMUST00000192232 530 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms