Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.84■□□□□ 0.29
Hdac4Q6NZM9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac4Q6NZM9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac4Q6NZM9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hdac4Q6NZM9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Hdac4Q6NZM9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hdac4Q6NZM9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hdac4Q6NZM9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Gm27741-201ENSMUST00000185060 237 ntBASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac4Q6NZM9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac4Q6NZM9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Gm13597-201ENSMUST00000121239 375 ntBASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.8■□□□□ 0.28
Hdac4Q6NZM9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms