Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn9aQ62205 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scn9aQ62205 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scn9aQ62205 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Scn9aQ62205 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.47■□□□□ 0.39
Scn9aQ62205 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scn9aQ62205 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.47■□□□□ 0.39
Scn9aQ62205 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scn9aQ62205 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn9aQ62205 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn9aQ62205 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn9aQ62205 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn9aQ62205 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn9aQ62205 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Scn9aQ62205 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn9aQ62205 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.46■□□□□ 0.39
Scn9aQ62205 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn9aQ62205 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scn9aQ62205 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.46■□□□□ 0.39
Scn9aQ62205 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Gm37230-201ENSMUST00000194491 818 ntBASIC17.46■□□□□ 0.39
Scn9aQ62205 Gm19220-201ENSMUST00000222682 803 ntBASIC17.46■□□□□ 0.39
Scn9aQ62205 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn9aQ62205 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scn9aQ62205 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scn9aQ62205 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.46■□□□□ 0.38
Scn9aQ62205 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn9aQ62205 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Scn9aQ62205 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Scn9aQ62205 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn9aQ62205 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn9aQ62205 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.44■□□□□ 0.38
Scn9aQ62205 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.44■□□□□ 0.38
Scn9aQ62205 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.44■□□□□ 0.38
Scn9aQ62205 Gm45331-201ENSMUST00000209868 554 ntBASIC17.44■□□□□ 0.38
Scn9aQ62205 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.44■□□□□ 0.38
Scn9aQ62205 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scn9aQ62205 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Scn9aQ62205 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Scn9aQ62205 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.44■□□□□ 0.38
Scn9aQ62205 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn9aQ62205 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Scn9aQ62205 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn9aQ62205 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.43■□□□□ 0.38
Scn9aQ62205 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scn9aQ62205 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn9aQ62205 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Mir125a-201ENSMUST00000083545 68 ntBASIC17.43■□□□□ 0.38
Scn9aQ62205 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.43■□□□□ 0.38
Scn9aQ62205 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.43■□□□□ 0.38
Scn9aQ62205 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn9aQ62205 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms