Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scarb1Q61009 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Scarb1Q61009 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Scarb1Q61009 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Scarb1Q61009 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.71□□□□□ -0.38
Scarb1Q61009 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scarb1Q61009 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.7□□□□□ -0.38
Scarb1Q61009 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.7□□□□□ -0.38
Scarb1Q61009 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.7□□□□□ -0.38
Scarb1Q61009 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.7□□□□□ -0.38
Scarb1Q61009 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.7□□□□□ -0.38
Scarb1Q61009 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Scarb1Q61009 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scarb1Q61009 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scarb1Q61009 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scarb1Q61009 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.69□□□□□ -0.38
Scarb1Q61009 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scarb1Q61009 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms