Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm23547-201ENSMUST00000158210 271 ntBASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm9172-201ENSMUST00000212092 954 ntBASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm12008-201ENSMUST00000117791 755 ntBASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms