Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Gm7488-201ENSMUST00000117148 684 ntBASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx49Q4FZF3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Gm7653-201ENSMUST00000214567 508 ntBASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx49Q4FZF3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Syt7-205ENSMUST00000224135 1557 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm15487-201ENSMUST00000122373 465 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm16215-201ENSMUST00000161990 637 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm25144-201ENSMUST00000179561 110 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm25352-201ENSMUST00000179815 110 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm28630-201ENSMUST00000187806 498 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm44855-201ENSMUST00000205725 362 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx49Q4FZF3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ddx49Q4FZF3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ddx49Q4FZF3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.45■□□□□ 0.38
Ddx49Q4FZF3 Gm18049-201ENSMUST00000208909 581 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms