Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdkl5Q3UTQ8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Gm27628-201ENSMUST00000184911 107 ntBASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdkl5Q3UTQ8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Gm18733-201ENSMUST00000173950 856 ntBASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdkl5Q3UTQ8 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms