Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sox4Q06831 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox4Q06831 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sox4Q06831 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Sox4Q06831 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox4Q06831 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox4Q06831 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Gm9385-201ENSMUST00000117563 472 ntBASIC14.78□□□□□ -0.04
Sox4Q06831 Gm27301-201ENSMUST00000184012 127 ntBASIC14.78□□□□□ -0.04
Sox4Q06831 Gm37935-201ENSMUST00000192012 982 ntBASIC14.78□□□□□ -0.04
Sox4Q06831 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.78□□□□□ -0.04
Sox4Q06831 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.78□□□□□ -0.04
Sox4Q06831 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Sox4Q06831 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox4Q06831 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox4Q06831 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox4Q06831 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sox4Q06831 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.77□□□□□ -0.04
Sox4Q06831 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox4Q06831 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Sox4Q06831 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.77□□□□□ -0.05
Sox4Q06831 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sox4Q06831 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
Sox4Q06831 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox4Q06831 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Sox4Q06831 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox4Q06831 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox4Q06831 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Sox4Q06831 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sox4Q06831 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.76□□□□□ -0.05
Sox4Q06831 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox4Q06831 Gm2272-201ENSMUST00000194903 582 ntBASIC14.76□□□□□ -0.05
Sox4Q06831 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.76□□□□□ -0.05
Sox4Q06831 Gm43767-201ENSMUST00000198933 381 ntBASIC14.76□□□□□ -0.05
Sox4Q06831 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.76□□□□□ -0.05
Sox4Q06831 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.76□□□□□ -0.05
Sox4Q06831 Gm10154-201ENSMUST00000084445 354 ntBASIC14.76□□□□□ -0.05
Sox4Q06831 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox4Q06831 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox4Q06831 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox4Q06831 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms