Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.4■□□□□ 0.06
Ybx1P62960 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Ybx1P62960 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.4■□□□□ 0.06
Ybx1P62960 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ybx1P62960 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.4■□□□□ 0.06
Ybx1P62960 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Ybx1P62960 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Ybx1P62960 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Ybx1P62960 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Ybx1P62960 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Gm11543-201ENSMUST00000120758 370 ntBASIC15.39■□□□□ 0.05
Ybx1P62960 Gm17837-201ENSMUST00000186435 985 ntBASIC15.39■□□□□ 0.05
Ybx1P62960 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.39■□□□□ 0.05
Ybx1P62960 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ybx1P62960 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ybx1P62960 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ybx1P62960 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Ybx1P62960 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Ybx1P62960 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Ybx1P62960 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.38■□□□□ 0.05
Ybx1P62960 Gm13015-201ENSMUST00000118674 204 ntBASIC15.38■□□□□ 0.05
Ybx1P62960 Gm27437-201ENSMUST00000183429 107 ntBASIC15.38■□□□□ 0.05
Ybx1P62960 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Gm29541-201ENSMUST00000191351 678 ntBASIC15.38■□□□□ 0.05
Ybx1P62960 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.38■□□□□ 0.05
Ybx1P62960 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ybx1P62960 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ybx1P62960 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ybx1P62960 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Ybx1P62960 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.37■□□□□ 0.05
Ybx1P62960 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ybx1P62960 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Ybx1P62960 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.37■□□□□ 0.05
Ybx1P62960 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.37■□□□□ 0.05
Ybx1P62960 Gm27306-201ENSMUST00000183970 107 ntBASIC15.37■□□□□ 0.05
Ybx1P62960 Gm38225-201ENSMUST00000194001 393 ntBASIC15.37■□□□□ 0.05
Ybx1P62960 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.37■□□□□ 0.05
Ybx1P62960 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.37■□□□□ 0.05
Ybx1P62960 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ybx1P62960 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.36■□□□□ 0.05
Ybx1P62960 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ybx1P62960 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms