Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lmo4P61969 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lmo4P61969 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Lmo4P61969 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.12□□□□□ -0.47
Lmo4P61969 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lmo4P61969 Gm27306-201ENSMUST00000183970 107 ntBASIC12.12□□□□□ -0.47
Lmo4P61969 Gm17837-201ENSMUST00000186435 985 ntBASIC12.12□□□□□ -0.47
Lmo4P61969 Gm18766-201ENSMUST00000189811 808 ntBASIC12.12□□□□□ -0.47
Lmo4P61969 Gm38294-201ENSMUST00000192831 381 ntBASIC12.12□□□□□ -0.47
Lmo4P61969 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.12□□□□□ -0.47
Lmo4P61969 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.12□□□□□ -0.47
Lmo4P61969 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.12□□□□□ -0.47
Lmo4P61969 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lmo4P61969 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lmo4P61969 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.11□□□□□ -0.47
Lmo4P61969 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Lmo4P61969 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lmo4P61969 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.11□□□□□ -0.47
Lmo4P61969 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Gm8410-201ENSMUST00000117225 605 ntBASIC12.11□□□□□ -0.47
Lmo4P61969 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.11□□□□□ -0.47
Lmo4P61969 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 Gm28630-201ENSMUST00000187806 498 ntBASIC12.11□□□□□ -0.47
Lmo4P61969 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.11□□□□□ -0.47
Lmo4P61969 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lmo4P61969 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lmo4P61969 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lmo4P61969 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.11□□□□□ -0.47
Lmo4P61969 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lmo4P61969 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.1□□□□□ -0.47
Lmo4P61969 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms