Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Gm15173-201ENSMUST00000122049 433 ntBASIC14.59□□□□□ -0.07
Hnf4aP49698 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Gm5682-201ENSMUST00000173402 505 ntBASIC14.59□□□□□ -0.07
Hnf4aP49698 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Gm9682-201ENSMUST00000197505 556 ntBASIC14.59□□□□□ -0.07
Hnf4aP49698 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.59□□□□□ -0.07
Hnf4aP49698 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hnf4aP49698 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hnf4aP49698 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hnf4aP49698 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.58□□□□□ -0.07
Hnf4aP49698 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hnf4aP49698 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hnf4aP49698 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hnf4aP49698 Celf4-206ENSMUST00000224553 1729 ntBASIC14.58□□□□□ -0.07
Hnf4aP49698 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Hnf4aP49698 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Hnf4aP49698 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.58□□□□□ -0.08
Hnf4aP49698 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Mir8098-201ENSMUST00000184011 137 ntBASIC14.58□□□□□ -0.08
Hnf4aP49698 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Gm6550-201ENSMUST00000187574 993 ntBASIC14.58□□□□□ -0.08
Hnf4aP49698 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hnf4aP49698 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Hnf4aP49698 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Gm7787-201ENSMUST00000216858 688 ntBASIC14.57□□□□□ -0.08
Hnf4aP49698 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.57□□□□□ -0.08
Hnf4aP49698 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hnf4aP49698 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hnf4aP49698 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hnf4aP49698 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hnf4aP49698 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hnf4aP49698 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hnf4aP49698 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hnf4aP49698 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hnf4aP49698 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hnf4aP49698 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms