Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HmgclP38060 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Gm13597-201ENSMUST00000121239 375 ntBASIC14.83□□□□□ -0.04
HmgclP38060 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.83□□□□□ -0.04
HmgclP38060 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HmgclP38060 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.83□□□□□ -0.04
HmgclP38060 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HmgclP38060 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
HmgclP38060 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.82□□□□□ -0.04
HmgclP38060 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.82□□□□□ -0.04
HmgclP38060 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.82□□□□□ -0.04
HmgclP38060 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.82□□□□□ -0.04
HmgclP38060 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HmgclP38060 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
HmgclP38060 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HmgclP38060 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HmgclP38060 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.81□□□□□ -0.04
HmgclP38060 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.81□□□□□ -0.04
HmgclP38060 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Gm2272-201ENSMUST00000194903 582 ntBASIC14.81□□□□□ -0.04
HmgclP38060 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.81□□□□□ -0.04
HmgclP38060 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.81□□□□□ -0.04
HmgclP38060 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HmgclP38060 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.81□□□□□ -0.04
HmgclP38060 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HmgclP38060 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HmgclP38060 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HmgclP38060 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HmgclP38060 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Efs-202ENSMUST00000227037 2540 ntBASIC14.8□□□□□ -0.04
HmgclP38060 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.8□□□□□ -0.04
HmgclP38060 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.8□□□□□ -0.04
HmgclP38060 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HmgclP38060 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HmgclP38060 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HmgclP38060 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HmgclP38060 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HmgclP38060 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.79□□□□□ -0.04
HmgclP38060 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HmgclP38060 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.79□□□□□ -0.04
HmgclP38060 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.79□□□□□ -0.04
HmgclP38060 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.79□□□□□ -0.04
HmgclP38060 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.79□□□□□ -0.04
HmgclP38060 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HmgclP38060 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.79□□□□□ -0.04
HmgclP38060 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms