Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Foxa1P35582 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Foxa1P35582 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.91□□□□□ -0.18
Foxa1P35582 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Foxa1P35582 Gm12260-201ENSMUST00000122447 411 ntBASIC13.91□□□□□ -0.18
Foxa1P35582 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.91□□□□□ -0.18
Foxa1P35582 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Gm9727-201ENSMUST00000161387 555 ntBASIC13.91□□□□□ -0.18
Foxa1P35582 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Foxa1P35582 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.91□□□□□ -0.18
Foxa1P35582 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Foxa1P35582 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Foxa1P35582 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Foxa1P35582 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Foxa1P35582 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Foxa1P35582 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Foxa1P35582 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.9□□□□□ -0.18
Foxa1P35582 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Foxa1P35582 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.9□□□□□ -0.18
Foxa1P35582 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Foxa1P35582 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.9□□□□□ -0.18
Foxa1P35582 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Gm12008-201ENSMUST00000117791 755 ntBASIC13.9□□□□□ -0.18
Foxa1P35582 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
Foxa1P35582 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.9□□□□□ -0.18
Foxa1P35582 Gm43767-201ENSMUST00000198933 381 ntBASIC13.9□□□□□ -0.18
Foxa1P35582 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.9□□□□□ -0.18
Foxa1P35582 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Foxa1P35582 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Foxa1P35582 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Foxa1P35582 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Foxa1P35582 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Foxa1P35582 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Foxa1P35582 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.89□□□□□ -0.19
Foxa1P35582 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Foxa1P35582 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Foxa1P35582 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.89□□□□□ -0.19
Foxa1P35582 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.89□□□□□ -0.19
Foxa1P35582 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Foxa1P35582 Gm27525-201ENSMUST00000184465 107 ntBASIC13.89□□□□□ -0.19
Foxa1P35582 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.89□□□□□ -0.19
Foxa1P35582 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Foxa1P35582 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms