Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.43■□□□□ 0.22
Pde6bP23440 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.43■□□□□ 0.22
Pde6bP23440 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pde6bP23440 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pde6bP23440 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.43■□□□□ 0.22
Pde6bP23440 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pde6bP23440 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pde6bP23440 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pde6bP23440 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.42■□□□□ 0.22
Pde6bP23440 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pde6bP23440 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.42■□□□□ 0.22
Pde6bP23440 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.42■□□□□ 0.22
Pde6bP23440 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.42■□□□□ 0.22
Pde6bP23440 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.42■□□□□ 0.22
Pde6bP23440 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pde6bP23440 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Pde6bP23440 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pde6bP23440 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.41■□□□□ 0.22
Pde6bP23440 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pde6bP23440 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pde6bP23440 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pde6bP23440 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.41■□□□□ 0.22
Pde6bP23440 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.41■□□□□ 0.22
Pde6bP23440 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.41■□□□□ 0.22
Pde6bP23440 Gm43125-201ENSMUST00000201724 730 ntBASIC16.41■□□□□ 0.22
Pde6bP23440 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.41■□□□□ 0.22
Pde6bP23440 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pde6bP23440 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pde6bP23440 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.4■□□□□ 0.22
Pde6bP23440 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pde6bP23440 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pde6bP23440 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Pde6bP23440 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
Pde6bP23440 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.4■□□□□ 0.22
Pde6bP23440 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.4■□□□□ 0.22
Pde6bP23440 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.4■□□□□ 0.22
Pde6bP23440 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms