Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hoxc6P10629 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Hoxc6P10629 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hoxc6P10629 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc6P10629 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Hoxc6P10629 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.62■□□□□ 0.25
Hoxc6P10629 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hoxc6P10629 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc6P10629 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.6■□□□□ 0.25
Hoxc6P10629 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.6■□□□□ 0.25
Hoxc6P10629 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Gm12490-201ENSMUST00000120255 560 ntBASIC16.6■□□□□ 0.25
Hoxc6P10629 Gm28631-201ENSMUST00000190740 334 ntBASIC16.6■□□□□ 0.25
Hoxc6P10629 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hoxc6P10629 Shd-206ENSMUST00000225145 998 ntBASIC16.6■□□□□ 0.25
Hoxc6P10629 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.6■□□□□ 0.25
Hoxc6P10629 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.6■□□□□ 0.25
Hoxc6P10629 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc6P10629 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.59■□□□□ 0.25
Hoxc6P10629 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.59■□□□□ 0.25
Hoxc6P10629 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.59■□□□□ 0.25
Hoxc6P10629 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hoxc6P10629 Prob1-201ENSMUST00000097619 3021 ntBASIC16.59■□□□□ 0.25
Hoxc6P10629 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.59■□□□□ 0.25
Hoxc6P10629 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc6P10629 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hoxc6P10629 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms