Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ApoeP08226 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ApoeP08226 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.25□□□□□ -0.13
ApoeP08226 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.25□□□□□ -0.13
ApoeP08226 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.24□□□□□ -0.13
ApoeP08226 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Gm15794-201ENSMUST00000120182 631 ntBASIC14.24□□□□□ -0.13
ApoeP08226 Rprl3-201ENSMUST00000157400 290 ntBASIC14.24□□□□□ -0.13
ApoeP08226 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.24□□□□□ -0.13
ApoeP08226 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.24□□□□□ -0.13
ApoeP08226 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.24□□□□□ -0.13
ApoeP08226 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ApoeP08226 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ApoeP08226 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.24□□□□□ -0.13
ApoeP08226 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ApoeP08226 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.23□□□□□ -0.13
ApoeP08226 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ApoeP08226 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.23□□□□□ -0.13
ApoeP08226 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Gm6433-201ENSMUST00000118634 875 ntBASIC14.23□□□□□ -0.13
ApoeP08226 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Gm11950-201ENSMUST00000121615 838 ntBASIC14.23□□□□□ -0.13
ApoeP08226 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Gm6345-202ENSMUST00000180900 204 ntBASIC14.23□□□□□ -0.13
ApoeP08226 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ApoeP08226 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ApoeP08226 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.23□□□□□ -0.13
ApoeP08226 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ApoeP08226 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ApoeP08226 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.23□□□□□ -0.13
ApoeP08226 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ApoeP08226 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ApoeP08226 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ApoeP08226 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ApoeP08226 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ApoeP08226 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ApoeP08226 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ApoeP08226 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ApoeP08226 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms