Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm8655-201ENSMUST00000221159 852 ntBASIC12.21□□□□□ -0.45
P06323 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.21□□□□□ -0.45
P06323 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.21□□□□□ -0.45
P06323 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06323 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06323 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06323 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
P06323 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
P06323 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06323 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.2□□□□□ -0.46
P06323 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06323 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06323 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.2□□□□□ -0.46
P06323 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.2□□□□□ -0.46
P06323 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.2□□□□□ -0.46
P06323 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.2□□□□□ -0.46
P06323 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.2□□□□□ -0.46
P06323 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.2□□□□□ -0.46
P06323 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P06323 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.2□□□□□ -0.46
P06323 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
P06323 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
P06323 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.2□□□□□ -0.46
P06323 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06323 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06323 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.19□□□□□ -0.46
P06323 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.19□□□□□ -0.46
P06323 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.19□□□□□ -0.46
P06323 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
P06323 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.19□□□□□ -0.46
P06323 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
P06323 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.19□□□□□ -0.46
P06323 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P06323 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.19□□□□□ -0.46
P06323 Gm27357-201ENSMUST00000183754 135 ntBASIC12.19□□□□□ -0.46
P06323 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.19□□□□□ -0.46
P06323 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.19□□□□□ -0.46
P06323 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.19□□□□□ -0.46
P06323 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
P06323 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
P06323 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P06323 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.19□□□□□ -0.46
P06323 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.19□□□□□ -0.46
P06323 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06323 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
P06323 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P06323 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06323 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.18□□□□□ -0.46
P06323 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.18□□□□□ -0.46
P06323 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06323 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P06323 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06323 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P06323 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms