Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IghmP01872 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IghmP01872 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IghmP01872 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IghmP01872 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Gm11764-201ENSMUST00000120221 623 ntBASIC14.1□□□□□ -0.15
IghmP01872 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Gm23547-201ENSMUST00000158210 271 ntBASIC14.1□□□□□ -0.15
IghmP01872 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
IghmP01872 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
IghmP01872 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
IghmP01872 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.1□□□□□ -0.15
IghmP01872 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
IghmP01872 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IghmP01872 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.09□□□□□ -0.15
IghmP01872 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.09□□□□□ -0.15
IghmP01872 Gm21362-201ENSMUST00000194272 928 ntBASIC14.09□□□□□ -0.15
IghmP01872 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.09□□□□□ -0.15
IghmP01872 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Rps4l-201ENSMUST00000071745 943 ntBASIC14.09□□□□□ -0.15
IghmP01872 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
IghmP01872 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
IghmP01872 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IghmP01872 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IghmP01872 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IghmP01872 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.09□□□□□ -0.15
IghmP01872 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
IghmP01872 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
IghmP01872 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
IghmP01872 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
IghmP01872 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
IghmP01872 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
IghmP01872 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Gm9103-201ENSMUST00000119371 405 ntBASIC14.08□□□□□ -0.16
IghmP01872 Gm7230-201ENSMUST00000173026 815 ntBASIC14.08□□□□□ -0.16
IghmP01872 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
IghmP01872 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
IghmP01872 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
IghmP01872 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
IghmP01872 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IghmP01872 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
IghmP01872 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
IghmP01872 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
IghmP01872 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.07□□□□□ -0.16
IghmP01872 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.07□□□□□ -0.16
IghmP01872 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
IghmP01872 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.07□□□□□ -0.16
IghmP01872 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
IghmP01872 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms