Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
IkbkbO88351 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IkbkbO88351 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IkbkbO88351 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
IkbkbO88351 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
IkbkbO88351 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.64■□□□□ 0.25
IkbkbO88351 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.64■□□□□ 0.25
IkbkbO88351 Gm5867-201ENSMUST00000063197 592 ntBASIC16.64■□□□□ 0.25
IkbkbO88351 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
IkbkbO88351 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
IkbkbO88351 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IkbkbO88351 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
IkbkbO88351 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
IkbkbO88351 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.63■□□□□ 0.25
IkbkbO88351 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
IkbkbO88351 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.63■□□□□ 0.25
IkbkbO88351 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.63■□□□□ 0.25
IkbkbO88351 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.63■□□□□ 0.25
IkbkbO88351 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
IkbkbO88351 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.63■□□□□ 0.25
IkbkbO88351 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.63■□□□□ 0.25
IkbkbO88351 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
IkbkbO88351 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.63■□□□□ 0.25
IkbkbO88351 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IkbkbO88351 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.62■□□□□ 0.25
IkbkbO88351 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.62■□□□□ 0.25
IkbkbO88351 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.62■□□□□ 0.25
IkbkbO88351 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.62■□□□□ 0.25
IkbkbO88351 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Sybu-209ENSMUST00000228639 4113 ntBASIC16.62■□□□□ 0.25
IkbkbO88351 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IkbkbO88351 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
IkbkbO88351 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.61■□□□□ 0.25
IkbkbO88351 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.61■□□□□ 0.25
IkbkbO88351 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.61■□□□□ 0.25
IkbkbO88351 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.61■□□□□ 0.25
IkbkbO88351 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IkbkbO88351 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.61■□□□□ 0.25
IkbkbO88351 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
IkbkbO88351 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms