Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.94□□□□□ -0.34
DffbO54788 Gm15165-201ENSMUST00000118140 502 ntBASIC12.94□□□□□ -0.34
DffbO54788 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.94□□□□□ -0.34
DffbO54788 Gm7506-201ENSMUST00000207758 815 ntBASIC12.94□□□□□ -0.34
DffbO54788 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.94□□□□□ -0.34
DffbO54788 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.94□□□□□ -0.34
DffbO54788 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DffbO54788 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
DffbO54788 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.93□□□□□ -0.34
DffbO54788 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.93□□□□□ -0.34
DffbO54788 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.93□□□□□ -0.34
DffbO54788 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
DffbO54788 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.93□□□□□ -0.34
DffbO54788 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.93□□□□□ -0.34
DffbO54788 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
DffbO54788 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
DffbO54788 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
DffbO54788 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.93□□□□□ -0.34
DffbO54788 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.93□□□□□ -0.34
DffbO54788 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.93□□□□□ -0.34
DffbO54788 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DffbO54788 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.93□□□□□ -0.34
DffbO54788 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
DffbO54788 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.92□□□□□ -0.34
DffbO54788 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
DffbO54788 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
DffbO54788 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Gm4459-201ENSMUST00000118750 468 ntBASIC12.92□□□□□ -0.34
DffbO54788 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.92□□□□□ -0.34
DffbO54788 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.92□□□□□ -0.34
DffbO54788 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DffbO54788 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.92□□□□□ -0.34
DffbO54788 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms