Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm7889-201ENSMUST00000185591 958 ntBASIC11.76□□□□□ -0.53
Tnfsf11O35235 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.76□□□□□ -0.53
Tnfsf11O35235 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Gm27389-201ENSMUST00000183622 195 ntBASIC11.75□□□□□ -0.53
Tnfsf11O35235 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.75□□□□□ -0.53
Tnfsf11O35235 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.75□□□□□ -0.53
Tnfsf11O35235 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Gm9987-201ENSMUST00000069768 567 ntBASIC11.75□□□□□ -0.53
Tnfsf11O35235 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfsf11O35235 Carlr-201ENSMUST00000181515 2574 ntBASIC11.74□□□□□ -0.53
Tnfsf11O35235 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Tnfsf11O35235 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.74□□□□□ -0.53
Tnfsf11O35235 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.74□□□□□ -0.53
Tnfsf11O35235 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf11O35235 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf11O35235 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms