Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Gm15372-201ENSMUST00000120729 834 ntBASIC13.43□□□□□ -0.26
Alx4O35137 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.43□□□□□ -0.26
Alx4O35137 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Alx4O35137 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx4O35137 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Alx4O35137 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.42□□□□□ -0.26
Alx4O35137 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.42□□□□□ -0.26
Alx4O35137 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Grk6-207ENSMUST00000225925 2769 ntBASIC13.42□□□□□ -0.26
Alx4O35137 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.42□□□□□ -0.26
Alx4O35137 Gm43767-201ENSMUST00000198933 381 ntBASIC13.42□□□□□ -0.26
Alx4O35137 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Gm7506-201ENSMUST00000207758 815 ntBASIC13.42□□□□□ -0.26
Alx4O35137 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.42□□□□□ -0.26
Alx4O35137 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Alx4O35137 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.42□□□□□ -0.26
Alx4O35137 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.42□□□□□ -0.26
Alx4O35137 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.42□□□□□ -0.26
Alx4O35137 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.42□□□□□ -0.26
Alx4O35137 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx4O35137 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.41□□□□□ -0.26
Alx4O35137 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Alx4O35137 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.41□□□□□ -0.26
Alx4O35137 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Gm13836-201ENSMUST00000121159 501 ntBASIC13.41□□□□□ -0.26
Alx4O35137 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.41□□□□□ -0.26
Alx4O35137 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms