Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.02□□□□□ -0.33
Gfra3O35118 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gfra3O35118 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Gfra3O35118 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.02□□□□□ -0.33
Gfra3O35118 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Gfra3O35118 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.02□□□□□ -0.33
Gfra3O35118 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gfra3O35118 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gfra3O35118 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gfra3O35118 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.01□□□□□ -0.33
Gfra3O35118 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.01□□□□□ -0.33
Gfra3O35118 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gfra3O35118 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.01□□□□□ -0.33
Gfra3O35118 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gfra3O35118 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.01□□□□□ -0.33
Gfra3O35118 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gfra3O35118 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.01□□□□□ -0.33
Gfra3O35118 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gfra3O35118 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Gfra3O35118 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13□□□□□ -0.33
Gfra3O35118 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Gfra3O35118 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Gm15427-201ENSMUST00000117288 531 ntBASIC13□□□□□ -0.33
Gfra3O35118 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13□□□□□ -0.33
Gfra3O35118 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Gfra3O35118 Gm6546-201ENSMUST00000192096 766 ntBASIC13□□□□□ -0.33
Gfra3O35118 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13□□□□□ -0.33
Gfra3O35118 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13□□□□□ -0.33
Gfra3O35118 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gfra3O35118 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gfra3O35118 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.99□□□□□ -0.33
Gfra3O35118 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.99□□□□□ -0.33
Gfra3O35118 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.99□□□□□ -0.33
Gfra3O35118 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms