Protein–RNA interactions for Protein: J3QMA2

Gm28051, Predicted gene, 28051, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28051J3QMA2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Gm28051J3QMA2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.27□□□□□ -0.6
Gm28051J3QMA2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Gm28051J3QMA2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm28051J3QMA2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm28051J3QMA2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Nsd1-203ENSMUST00000224156 1149 ntBASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm28051J3QMA2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm28051J3QMA2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Gm28051J3QMA2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms