Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.15□□□□□ -0.14
Colca2F8VPY8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Colca2F8VPY8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.14□□□□□ -0.15
Colca2F8VPY8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Gm5035-201ENSMUST00000215581 927 ntBASIC14.14□□□□□ -0.15
Colca2F8VPY8 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.14□□□□□ -0.15
Colca2F8VPY8 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.14□□□□□ -0.15
Colca2F8VPY8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Mir125a-201ENSMUST00000083545 68 ntBASIC14.14□□□□□ -0.15
Colca2F8VPY8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Colca2F8VPY8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Gm12585-201ENSMUST00000117307 290 ntBASIC14.13□□□□□ -0.15
Colca2F8VPY8 Gm8749-201ENSMUST00000117737 331 ntBASIC14.13□□□□□ -0.15
Colca2F8VPY8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.13□□□□□ -0.15
Colca2F8VPY8 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.13□□□□□ -0.15
Colca2F8VPY8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Colca2F8VPY8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Gm27701-201ENSMUST00000184498 110 ntBASIC14.12□□□□□ -0.15
Colca2F8VPY8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.12□□□□□ -0.15
Colca2F8VPY8 AA619741-201ENSMUST00000195095 646 ntBASIC14.12□□□□□ -0.15
Colca2F8VPY8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.12□□□□□ -0.15
Colca2F8VPY8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Colca2F8VPY8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms