Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syce3B5KM66 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Gm12008-201ENSMUST00000117791 755 ntBASIC17.24■□□□□ 0.35
Syce3B5KM66 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Gm43799-201ENSMUST00000201845 579 ntBASIC17.24■□□□□ 0.35
Syce3B5KM66 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.24■□□□□ 0.35
Syce3B5KM66 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.24■□□□□ 0.35
Syce3B5KM66 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Syce3B5KM66 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Syce3B5KM66 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.23■□□□□ 0.35
Syce3B5KM66 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.23■□□□□ 0.35
Syce3B5KM66 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.23■□□□□ 0.35
Syce3B5KM66 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Syce3B5KM66 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Syce3B5KM66 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Syce3B5KM66 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Syce3B5KM66 Celf4-206ENSMUST00000224553 1729 ntBASIC17.22■□□□□ 0.35
Syce3B5KM66 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Syce3B5KM66 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.22■□□□□ 0.35
Syce3B5KM66 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.22■□□□□ 0.35
Syce3B5KM66 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Syce3B5KM66 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.22■□□□□ 0.35
Syce3B5KM66 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.22■□□□□ 0.35
Syce3B5KM66 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.22■□□□□ 0.35
Syce3B5KM66 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Syce3B5KM66 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms