Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Mir5130-201ENSMUST00000175160 84 ntBASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm27389-201ENSMUST00000183622 195 ntBASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm29257-201ENSMUST00000186115 639 ntBASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms