Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm13168-201ENSMUST00000121771 632 ntBASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm8520-201ENSMUST00000186517 868 ntBASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm25406-201ENSMUST00000157599 105 ntBASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-3A0A0B4J1H2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms