Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Carlr-201ENSMUST00000181515 2574 ntBASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rprl3-201ENSMUST00000157400 290 ntBASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm44454-201ENSMUST00000198541 138 ntBASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Celf4-206ENSMUST00000224553 1729 ntBASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms