Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm29518-201ENSMUST00000190858 372 ntBASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm18622-201ENSMUST00000219361 595 ntBASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm12497-201ENSMUST00000138778 237 ntBASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms