Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav16d-dv11A0A075B617 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav16d-dv11A0A075B617 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav16d-dv11A0A075B617 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav16d-dv11A0A075B617 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms