Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Grk6-207ENSMUST00000225925 2769 ntBASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-1A0A075B5Z8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm43767-201ENSMUST00000198933 381 ntBASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-1A0A075B5Z8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-1A0A075B5Z8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-1A0A075B5Z8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-1A0A075B5Z8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm8655-201ENSMUST00000221159 852 ntBASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms