Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Gm27989-201ENSMUST00000184721 107 ntBASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col13a1Q9R1N9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col13a1Q9R1N9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col13a1Q9R1N9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col13a1Q9R1N9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.83□□□□□ -0.35
Col13a1Q9R1N9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col13a1Q9R1N9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.83□□□□□ -0.35
Col13a1Q9R1N9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col13a1Q9R1N9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Gm13223-201ENSMUST00000118609 747 ntBASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Rpph1-201ENSMUST00000175096 319 ntBASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col13a1Q9R1N9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm22065-201ENSMUST00000103753 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm22066-201ENSMUST00000103761 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm24932-201ENSMUST00000103763 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm24115-201ENSMUST00000103799 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm22190-201ENSMUST00000103827 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm22191-201ENSMUST00000103831 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm24721-201ENSMUST00000103849 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm28018-201ENSMUST00000103869 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm26399-201ENSMUST00000103937 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm25349-201ENSMUST00000177728 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm23616-201ENSMUST00000177797 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm25871-201ENSMUST00000177816 110 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms