Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Rpph1-201ENSMUST00000175096 319 ntBASIC13.28□□□□□ -0.28
Nubp1Q9R060 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Mir8102-201ENSMUST00000184148 139 ntBASIC13.28□□□□□ -0.28
Nubp1Q9R060 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Gm6312-201ENSMUST00000204060 1194 ntBASIC13.28□□□□□ -0.28
Nubp1Q9R060 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.28□□□□□ -0.28
Nubp1Q9R060 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Gm8872-201ENSMUST00000197475 1341 ntBASIC13.28□□□□□ -0.28
Nubp1Q9R060 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nubp1Q9R060 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Nubp1Q9R060 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nubp1Q9R060 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nubp1Q9R060 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Gm27306-201ENSMUST00000183970 107 ntBASIC13.27□□□□□ -0.29
Nubp1Q9R060 Gm2272-201ENSMUST00000194903 582 ntBASIC13.27□□□□□ -0.29
Nubp1Q9R060 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.27□□□□□ -0.29
Nubp1Q9R060 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms