Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim39Q9ESN2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Gm12644-201ENSMUST00000119935 606 ntBASIC14.12□□□□□ -0.15
Trim39Q9ESN2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim39Q9ESN2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Gm9103-201ENSMUST00000119371 405 ntBASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Gm28033-201ENSMUST00000184224 96 ntBASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.11□□□□□ -0.15
Trim39Q9ESN2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 323.2 ms