Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tubb3Q9ERD7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tubb3Q9ERD7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tubb3Q9ERD7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms