Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Gm13312-201ENSMUST00000119631 718 ntBASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Gm14722-201ENSMUST00000118943 689 ntBASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Olfr129-201ENSMUST00000122318 993 ntBASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp1bQ9EPL6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Mir3081-201ENSMUST00000175305 84 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm8825-201ENSMUST00000182565 998 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm4518-201ENSMUST00000182638 718 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.28□□□□□ -0.28
Mmp1bQ9EPL6 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms