Protein–RNA interactions for Protein: Q9D5Q6

Speer4f1, MCG6381, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer4f1Q9D5Q6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Speer4f1Q9D5Q6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Gm13597-201ENSMUST00000121239 375 ntBASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Speer4f1Q9D5Q6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Gm1401-201ENSMUST00000122048 772 ntBASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Speer4f1Q9D5Q6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Speer4f1Q9D5Q6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Psmb5-202ENSMUST00000227257 622 ntBASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Speer4f1Q9D5Q6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms